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MolNFT v1 · #129640 · protein

Structure of CHK1 12-pt. mutant complex with arylbenzamide LRRK2 inhibitor

5OQ8 · SERINE/THREONINE-protein kinase CHK1: “Structure of CHK1 12-pt. mutant complex with arylbenzamide LRRK2 inhibitor”. X-ray diffraction, 1 ligand (A0Q), 1 pocket (best druggability 0.67). MolNFT v1 #129640 on GenesisL1: 3D structure…

PDB
5OQ8
Type
protein
Length
261 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase CHK1
EC
2.7.11.1
UniProt
O14757
Ligands
A0Q
Pockets
1 · best druggability 0.67

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 23% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASERINE/THREONINE-protein kinase CHK1 (EC 2.7.11.1)protein26135% helix, 23% strandO14757

Ligands and binding sites

  • A0Q · 5-(4-methylpiperazin-1-yl)-2-phenylmethoxy-~{N}-pyridin-3-yl-benzamide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12080.670.8423A0Q

Compared structures

  • 5OQ8 · Structure of CHK1 12-pt. mutant complex with arylbenzamide LRRK2 inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
  • O14757 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase CHK1 (O14757) · a predicted model of the same protein · chain A against A, TM-score 0.96
  • 2C3K · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.96
  • 2C3J · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.95
  • 2C3L · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.94

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