MolNFT v1 · #129610 · protein
ROBO1 IG1-4 crystals form 2
5OPE · Roundabout homolog 1: “ROBO1 IG1-4 crystals form 2”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.70). MolNFT v1 #129610 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OPE
- Type
- protein
- Length
- 384 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Roundabout homolog 1
- UniProt
- Q9Y6N7
- Ligands
- PO4
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Roundabout homolog 1 | protein | 384 | 2% helix, 47% strand | Q9Y6N7 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 511 | 0.70 | 0.80 | 54 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y6N7
- Elsewhere: RCSB PDB 5OPE · PDBe 5OPE · UniProt Q9Y6N7
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