MolNFT v1 · #129461 · protein
Crystal structure of an inactivated ssp siclopps intein with cfahpq extein
5OL5: “Crystal structure of an inactivated ssp siclopps intein with cfahpq extein”. X-ray diffraction, 1 ligand (CO). MolNFT v1 #129461 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OL5
- Type
- protein
- Length
- 560 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P74750
- Ligands
- CO
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 140 | — | P74750 |
| C, D | — | protein | 140 | — | P74750 |
Ligands and binding sites
- CO · Cobalt (II) ion · metal · 2 copies · chains A, D
- EDO · 1,2-ethanediol · additive · 2 copies · chains C
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OL5 · Crystal structure of an inactivated Ssp SICLOPPS intein with CFAHPQ extein · the same entry in another collection · chain D against D, TM-score 1.00
- P74750 · AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (P74750) · a predicted model of the same protein · chain B against A, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P74750
- Elsewhere: RCSB PDB 5OL5 · PDBe 5OL5 · UniProt P74750
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