MolNFT v1 · #129402 · protein
Structure of mbq nmh
5OJB · Myoglobin: “Structure of mbq nmh”. X-ray diffraction, 1 ligand (HEM), 1 pocket (best druggability 0.69). MolNFT v1 #129402 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OJB
- Type
- protein
- Length
- 154 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Myoglobin
- UniProt
- P02185
- Ligands
- HEM
- Pockets
- 1 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myoglobin | protein | 154 | 75% helix, 0% strand | P02185 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 264 | 0.69 | 0.84 | 25 | HEM, IMD |
Modifications
Observed in the structure: 1 modified (methylation).
Compared structures
- 5OJB · Structure of MbQ NMH · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02185
- Elsewhere: RCSB PDB 5OJB · PDBe 5OJB · UniProt P02185
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