MolNFT v1 · #129398 · protein
Sirtuin 4 orthologue from xenopus tropicalis in complex with ADP- ribose
5OJ7: “Sirtuin 4 orthologue from xenopus tropicalis in complex with ADP- ribose”. X-ray diffraction, 2 ligands (AR6, ZN). MolNFT v1 #129398 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OJ7
- Type
- protein
- Length
- 286 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q28CB4
- Ligands
- AR6, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 286 | — | Q28CB4 |
Ligands and binding sites
- AR6 · [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl [hydroxy-[[(2R,3S,4R,5S)-3,4,5-trihydroxyoxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate · ligand · chains A
- ZN · Zinc ion · metal · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OJ7 · Sirtuin 4 orthologue from Xenopus Tropicalis in complex with ADP-ribose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28CB4
- Elsewhere: RCSB PDB 5OJ7 · PDBe 5OJ7 · UniProt Q28CB4
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