MolNFT v1 · #129385 · protein
Crystal structure of pilf type IV pilus assembly ATPase from thermus thermophilus
5OIU: “Crystal structure of pilf type IV pilus assembly ATPase from thermus thermophilus”. X-ray diffraction, 4 ligands (ATP, MG, ZN). MolNFT v1 #129385 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OIU
- Type
- protein
- Length
- 2,314 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5SLC9
- Ligands
- ATP, MG, ZN, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 385 | — | Q5SLC9 |
| B | — | protein | 385 | — | Q5SLC9 |
| C, D, E, F | — | protein | 386 | — | Q5SLC9 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 6 copies · chains A, B, C, D, E, F
- MG · Magnesium ion · metal · 6 copies · chains A, B, C, D, E, F
- ZN · Zinc ion · metal · 6 copies · chains A, B, C, D, E, F
- CL · Chloride ion · ion · 12 copies · chains A, F, B, E, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OIU · Crystal structure of PilF type IV pilus assembly ATPase from Thermus thermophilus · the same entry in another collection · chain F against F, TM-score 1.00
- Q5SLC9 · AlphaFold monomer V2.0 prediction for type IV pilus assembly ATPase pilb (Q5SLC9) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SLC9
- Elsewhere: RCSB PDB 5OIU · PDBe 5OIU · UniProt Q5SLC9
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