MolNFT v1 · #129239 · protein
Structure of large terminase from the thermophilic bacteriophage D6E (crystal form 3)
5OEE: “Structure of large terminase from the thermophilic bacteriophage D6E (crystal form 3)”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #129239 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OEE
- Type
- protein
- Length
- 2,412 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- E5DV50
- Ligands
- NA
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 404 | — | E5DV50 |
| B | — | protein | 406 | — | E5DV50 |
| C | — | protein | 397 | — | E5DV50 |
| D | — | protein | 405 | — | E5DV50 |
| F | — | protein | 396 | — | E5DV50 |
Ligands and binding sites
- NA · Sodium ion · metal · 6 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E5DV50
- Elsewhere: RCSB PDB 5OEE · PDBe 5OEE · UniProt E5DV50
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