MolNFT v1 · #129233 · protein
Structure of large terminase from the thermophilic bacteriophage D6E (crystal form 2)
5OE8: “Structure of large terminase from the thermophilic bacteriophage D6E (crystal form 2)”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #129233 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OE8
- Type
- protein
- Length
- 1,221 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- E5DV50
- Ligands
- CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 407 | — | E5DV50 |
| B | — | protein | 406 | — | E5DV50 |
| C | — | protein | 408 | — | E5DV50 |
Ligands and binding sites
- CL · Chloride ion · ion · 6 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OE8 · Structure of large terminase from the thermophilic bacteriophage D6E (Crystal form 2) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E5DV50
- Elsewhere: RCSB PDB 5OE8 · PDBe 5OE8 · UniProt E5DV50
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.