MolNFT v1 · #129199 · protein
Structure of the engineered metalloesterase MID1SC9
5OD9: “Structure of the engineered metalloesterase MID1SC9”. X-ray diffraction, 4 ligands (9RW, ZN, MG). MolNFT v1 #129199 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OD9
- Type
- protein
- Length
- 183 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- 9RW, ZN, MG, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 95 | — | — |
| B | — | protein | 88 | — | — |
Ligands and binding sites
- 9RW · (2~{S})-2-phenylpropanoic acid · ligand · chains A
- ZN · Zinc ion · metal · 4 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · 3 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 2 copies · chains A
- IMD · Imidazole · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OD9 · Structure of the engineered metalloesterase MID1sc9 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5OD9 · PDBe 5OD9
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