MolNFT v1 · #129191 · protein
Structure of the engineered metalloesterase MID1SC10 complexed with a phosphonate transition state analogue
5OD1: “Structure of the engineered metalloesterase MID1SC10 complexed with a phosphonate transition state analogue”. X-ray diffraction, 2 ligands (9RQ, ZN). MolNFT v1 #129191 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OD1
- Type
- protein
- Length
- 94 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- 9RQ, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 94 | — | — |
Ligands and binding sites
- 9RQ · [2-oxidanylidene-7-[oxidanyl-[(1~{S})-1-phenylethyl]phosphoryl]oxy-chromen-4-yl]methanesulfonic acid · ligand · chains A
- ZN · Zinc ion · metal · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OD1 · Structure of the engineered metalloesterase MID1sc10 complexed with a phosphonate… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5OD1 · PDBe 5OD1
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