MolNFT v1 · #129171 · protein
The crystal structure of human ABCB8 in an outward-facing state
5OCH: “The crystal structure of human ABCB8 in an outward-facing state”. X-ray diffraction, 3 ligands (ADP, Y01, MG). MolNFT v1 #129171 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OCH
- Type
- protein
- Length
- 4,484 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NUT2
- Ligands
- ADP, Y01, MG
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 552 | — | Q9NUT2 |
| B | — | protein | 573 | — | Q9NUT2 |
| C | — | protein | 537 | — | Q9NUT2 |
| D | — | protein | 573 | — | Q9NUT2 |
| E | — | protein | 576 | — | Q9NUT2 |
| F | — | protein | 573 | — | Q9NUT2 |
| G | — | protein | 552 | — | Q9NUT2 |
| H | — | protein | 548 | — | Q9NUT2 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- Y01 · Cholesterol hemisuccinate · ligand · 7 copies · chains A, B, D, E, F, G, H
- MG · Magnesium ion · metal · 8 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OCH · The crystal structure of human ABCB8 in an outward-facing state · the same entry in another collection · chain H against H, TM-score 1.00
- Q9NUT2 · AlphaFold monomer V2.0 prediction for mitochondrial potassium channel ATP-binding subunit… · a predicted model of the same protein · chain C against A, TM-score 0.81
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NUT2
- Elsewhere: RCSB PDB 5OCH · PDBe 5OCH · UniProt Q9NUT2
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