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MolNFT v1 · #129127 · protein

Fab complex with grobeta. abvance: increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery.

5OB5: “Fab complex with grobeta. abvance: increasing our knowledge of antibody structural space to enable faster and…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #129127 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5OB5
Type
protein
Length
496 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P19875
Ligands
SO4

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein63—P19875
H—protein220——
L—protein213——

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 3 copies · chains H
  • GOL · Glycerol · additive · 4 copies · chains A, H, L

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OB5 · fAb complex with GroBeta. AbVance: increasing our knowledge of antibody structural space… · the same entry in another collection · chain A against A, TM-score 1.00
  • P19875 · AlphaFold monomer V2.0 prediction for C-X-C motif chemokine 2 (P19875) · a predicted model of the same protein · chain A against A, TM-score 0.91

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