MolNFT v1 · #129054 · protein
Conformational dynamism for DNA interaction in salmonella typhimurium rcsb response regulator.
5O8Z: “Conformational dynamism for DNA interaction in salmonella typhimurium rcsb response regulator.”. X-ray diffraction, 2 ligands (BEF, MG). MolNFT v1 #129054 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O8Z
- Type
- protein
- Length
- 409 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P58663
- Ligands
- BEF, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 200 | — | P58663 |
| B | — | protein | 209 | — | P58663 |
Ligands and binding sites
- BEF · Beryllium trifluoride ion · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O8Z · Conformational dynamism for DNA interaction in Salmonella typhimurium RcsB response… · the same entry in another collection · chain A against A, TM-score 1.00
- P58663 · AlphaFold monomer V2.0 prediction for transcriptional regulatory protein rcsb (P58663) · a predicted model of the same protein · chain B against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P58663
- Elsewhere: RCSB PDB 5O8Z · PDBe 5O8Z · UniProt P58663
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