MolNFT v1 · #128975 · protein
Structure of polyphosphate kinase from meiothermus ruber N121D bound to ATP
5O6M: “Structure of polyphosphate kinase from meiothermus ruber N121D bound to ATP”. X-ray diffraction, 2 ligands (ATP, PO4). MolNFT v1 #128975 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O6M
- Type
- protein
- Length
- 1,042 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0S7ASE9
- Ligands
- ATP, PO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 256 | — | A0A0S7ASE9 |
| B | — | protein | 261 | — | A0A0S7ASE9 |
| C | — | protein | 261 | — | A0A0S7ASE9 |
| D | — | protein | 264 | — | A0A0S7ASE9 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 4 copies · chains A, B, C, D
- PO4 · Phosphate ion · ion · 22 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O6M · Structure of Polyphosphate Kinase from Meiothermus ruber N121D bound to ATP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0S7ASE9
- Elsewhere: RCSB PDB 5O6M · PDBe 5O6M · UniProt A0A0S7ASE9
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