MolNFT v1 · #128945 · protein
Poliovirus type 3 (strain saukett) stabilized virus-like particle in complex with the pocket factor compound GPP3
5O5P: “Poliovirus type 3 (strain saukett) stabilized virus-like particle in complex with the pocket factor compound…”. Electron microscopy, 1 ligand (9LW). MolNFT v1 #128945 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O5P
- Type
- protein
- Length
- 747 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q84895, P03302
- Ligands
- 9LW
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 1 | — | protein | 235 | — | Q84895 |
| 2 | — | protein | 260 | — | Q84895 |
| 3 | — | protein | 235 | — | Q84895 |
| 4 | — | protein | 17 | — | P03302 |
Ligands and binding sites
- 9LW · 1-[5-[4-(ethoxyiminomethyl)phenoxy]-3-methyl-pentyl]-3-pyridin-4-yl-imidazol-2-one · ligand · chains 1, 3
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O5P · Poliovirus type 3 (strain Saukett) stabilized virus-like particle in complex with the… · the same entry in another collection · chain 1 against 1, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84895
- Every structure of UniProt P03302
- Elsewhere: RCSB PDB 5O5P · PDBe 5O5P · UniProt Q84895 · UniProt P03302
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