MolNFT v1 · #128804 · protein

Structure of latex clearing protein lcp in the closed state

5O1M: “Structure of latex clearing protein lcp in the closed state”. X-ray diffraction, 1 ligand (HEM). MolNFT v1 #128804 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5O1M
Type: protein
Length: 742 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q3L8N0
Ligands: HEM

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	371	—	Q3L8N0

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B
EDO · 1,2-ethanediol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5O1M · Structure of Latex Clearing Protein LCP in the closed state · the same entry in another collection · chain A against A, TM-score 1.00
Q3L8N0 · AlphaFold monomer V2.0 prediction for rubber oxygenase (Q3L8N0) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3L8N0
Elsewhere: RCSB PDB 5O1M · PDBe 5O1M · UniProt Q3L8N0

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