MolNFT v1 · #128789 · protein
Crystal structure of murine neuroglobin under 100 bar krypton
5O17: “Crystal structure of murine neuroglobin under 100 bar krypton”. X-ray diffraction, 3 ligands (HEM, KR, SO4), 1 pocket (best druggability 0.75). MolNFT v1 #128789 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O17
- Type
- protein
- Length
- 148 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Neuroglobin
- UniProt
- Q9ER97
- Ligands
- HEM, KR, SO4
- Pockets
- 1 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 80% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neuroglobin | protein | 148 | 80% helix, 1% strand | Q9ER97 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
- KR · Krypton · ion · 4 copies · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 244 | 0.75 | 0.88 | 32 | HEM, KR |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ER97
- Elsewhere: RCSB PDB 5O17 · PDBe 5O17 · UniProt Q9ER97
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