MolNFT v1 · #128773 · protein

Deglycosylated nogo receptor with native disulfide structure

5O0R: “Deglycosylated nogo receptor with native disulfide structure”. X-ray diffraction, 2 ligands (NAG, CL). MolNFT v1 #128773 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5O0R
Type: protein
Length: 573 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q99PI8
Ligands: NAG, CL

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	289	—	Q99PI8
B	—	protein	284	—	Q99PI8

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A, B
CL · Chloride ion · ion · 3 copies · chains B, A
GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5O0R · Deglycosylated Nogo Receptor with native disulfide structure · the same entry in another collection · chain A against A, TM-score 1.00
Q99PI8 · AlphaFold monomer V2.0 prediction for reticulon-4 receptor (Q99PI8) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q99PI8
Elsewhere: RCSB PDB 5O0R · PDBe 5O0R · UniProt Q99PI8

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