MolNFT v1 · #128766 · protein
Deglycosylated nogo receptor with native disulfide structure
5O0K · Reticulon-4 receptor: “Deglycosylated nogo receptor with native disulfide structure”. X-ray diffraction, 2 ligands (NAG, CL). MolNFT v1 #128766 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O0K
- Type
- protein
- Length
- 580 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Reticulon-4 receptor
- UniProt
- Q99PI8
- Ligands
- NAG, CL
Structure
x-ray diffraction · 2 distinct chains · 9% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Reticulon-4 receptor | protein | 291 | 9% helix, 17% strand | Q99PI8 |
| B | Reticulon-4 receptor | protein | 289 | 9% helix, 17% strand | Q99PI8 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A, B
- CL · Chloride ion · ion · 3 copies · chains A, B
- GOL · Glycerol · additive · 7 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 10 disulfide, 6 glycan (disulfide, N-glycosylation).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99PI8
- Elsewhere: RCSB PDB 5O0K · PDBe 5O0K · UniProt Q99PI8
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