MolNFT v1 · #128760 · protein
Crystal structure of phosphopantetheine adenylyltransferase from mycobacterium abcessus in complex with 3-phenoxymandelic acid (fragment 4)
5O0D: “Crystal structure of phosphopantetheine adenylyltransferase from mycobacterium abcessus in complex with…”. X-ray diffraction, 1 ligand (9F5). MolNFT v1 #128760 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O0D
- Type
- protein
- Length
- 470 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B1MDL6
- Ligands
- 9F5
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 157 | — | B1MDL6 |
| C | — | protein | 156 | — | B1MDL6 |
Ligands and binding sites
- 9F5 · (2~{S})-2-oxidanyl-2-(3-phenoxyphenyl)ethanoic acid · ligand · 2 copies · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O0D · Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus… · the same entry in another collection · chain A against A, TM-score 1.00
- B1MDL6 · AlphaFold monomer V2.0 prediction for phosphopantetheine adenylyltransferase (B1MDL6) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1MDL6
- Elsewhere: RCSB PDB 5O0D · PDBe 5O0D · UniProt B1MDL6
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