MolNFT v1 · #128751 · protein
GII.10 vietnam 026 protruding domain in complex with nanobody nano-32
5O03: “GII.10 vietnam 026 protruding domain in complex with nanobody nano-32”. X-ray diffraction. MolNFT v1 #128751 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O03
- Type
- protein
- Length
- 887 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5F4T5
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 310 | — | Q5F4T5 |
| B | — | protein | 312 | — | Q5F4T5 |
| C | — | protein | 132 | — | — |
| D | — | protein | 133 | — | — |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 15 copies · chains A, B, C
- IMD · Imidazole · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O03 · GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-32 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5F4T5
- Elsewhere: RCSB PDB 5O03 · PDBe 5O03 · UniProt Q5F4T5
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