MolNFT v1 · #128602 · protein
NMR assignment and structure of a peptide derived from the fusion peptide of HIV-1 GP41 in the presence of dodecylphosphocholine micelles
5NVP · Envelope GLYCOPROTEIN,GP41: “NMR assignment and structure of a peptide derived from the fusion peptide of HIV-1 GP41 in the presence of…”. Solution nmr, 1 ligand (ACA). MolNFT v1 #128602 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5NVP
- Type
- protein
- Length
- 34 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Envelope GLYCOPROTEIN,GP41
- UniProt
- A1YNH3, Q69894
- Ligands
- ACA
Structure
solution nmr · 1 distinct chain · 71% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Envelope GLYCOPROTEIN,GP41 | protein | 34 | 71% helix, 0% strand | A1YNH3, Q69894 |
Ligands and binding sites
- ACA · 6-aminohexanoic acid · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 5NVP · NMR assignment and structure of a peptide derived from the fusion peptide of HIV-1 gp41… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1YNH3
- Every structure of UniProt Q69894
- Elsewhere: RCSB PDB 5NVP · PDBe 5NVP · UniProt A1YNH3 · UniProt Q69894
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