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MolNFT v1 · #128586 · protein

Substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site

5NV9: “Substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site”. X-ray diffraction, 3 ligands (SLB, NA, PO4). MolNFT v1 #128586 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5NV9
Type
protein
Length
480 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
B4EZY7
Ligands
SLB, NA, PO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein480—B4EZY7

Ligands and binding sites

  • SLB · N-acetyl-beta-neuraminic acid · sugar · chains A
  • NA · Sodium ion · metal · 2 copies · chains A
  • PO4 · Phosphate ion · ion · chains A
  • LMT · Dodecyl-beta-D-maltoside · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5NV9 · Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel… · the same entry in another collection · chain A against A, TM-score 1.00

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