MolNFT v1 · #128385 · protein
Crystal structure of C.ELEGANS thymidylate synthase in complex with dump and tomudex
5NOO: “Crystal structure of C.ELEGANS thymidylate synthase in complex with dump and tomudex”. X-ray diffraction, 1 ligand (UMP). MolNFT v1 #128385 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NOO
- Type
- protein
- Length
- 1,148 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y052
- Ligands
- UMP
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 288 | — | Q9Y052 |
| C | — | protein | 285 | — | Q9Y052 |
| D | — | protein | 287 | — | Q9Y052 |
Ligands and binding sites
- UMP · 2'-deoxyuridine 5'-monophosphate · ligand · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NOO · Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y052
- Elsewhere: RCSB PDB 5NOO · PDBe 5NOO · UniProt Q9Y052
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