MolNFT v1 · #12838 · protein

Crystal structure of C. elegans AP4A hydrolase

1KT9 · Diadenosine tetraphosphate hydrolase: “Crystal structure of C. elegans AP4A hydrolase”. X-ray diffraction, 1 pocket (best druggability 0.38). MolNFT v1 #12838 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1KT9
Type: protein
Length: 132 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Diadenosine tetraphosphate hydrolase
EC: 3.6.1.17
UniProt: Q9U2M7
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Diadenosine tetraphosphate hydrolase (EC 3.6.1.17)	protein	132	29% helix, 39% strand	Q9U2M7

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	68	0.38	0.78	16	empty

Compared structures

1KT9 · Crystal Structure of C. elegans Ap4A Hydrolase · the same entry in another collection · chain A against A, TM-score 1.00
Q9U2M7 · AlphaFold monomer V2.0 prediction for BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9U2M7
Elsewhere: RCSB PDB 1KT9 · PDBe 1KT9 · UniProt Q9U2M7

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