MolNFT v1 · #128247 · protein
Crystal structure of a dual topology fluoride ion channel.
5NKQ: “Crystal structure of a dual topology fluoride ion channel.”. X-ray diffraction, 2 ligands (NA, F). MolNFT v1 #128247 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NKQ
- Type
- protein
- Length
- 849 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q7VYU0
- Ligands
- NA, F
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 127 | — | Q7VYU0 |
| B, D | — | protein | 124 | — | Q7VYU0 |
| C | — | protein | 126 | — | Q7VYU0 |
| E | — | protein | 87 | — | — |
| F | — | protein | 86 | — | — |
| G | — | protein | 88 | — | — |
| H | — | protein | 87 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · 2 copies · chains A, B, C, D
- F · Fluoride ion · ion · 8 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NKQ · Crystal structure of a dual topology fluoride ion channel. · the same entry in another collection · chain H against H, TM-score 1.00
- Q7VYU0 · AlphaFold monomer V2.0 prediction for putative fluoride ion transporter crcb (Q7VYU0) · a predicted model of the same protein · chain C against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7VYU0
- Elsewhere: RCSB PDB 5NKQ · PDBe 5NKQ · UniProt Q7VYU0
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