MolNFT v1 · #128209 · protein
Roll out the beta-barrel: structure and mechanism of PAC13, a unique nucleoside dehydratase
5NJN · Putative CUPIN_2 domain-containing isomerase: “Roll out the beta-barrel: structure and mechanism of PAC13, a unique nucleoside dehydratase”. X-ray diffraction, 1 pocket (best druggability 0.62). MolNFT v1 #128209 on GenesisL1: 3D…
- PDB
- 5NJN
- Type
- protein
- Length
- 120 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative CUPIN_2 domain-containing isomerase
- UniProt
- E2EKP5
- Pockets
- 1 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 58% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative CUPIN_2 domain-containing isomerase | protein | 120 | 5% helix, 58% strand | E2EKP5 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 100 | 0.62 | 0.87 | 20 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 5NJN · Roll out the beta-barrel: structure and mechanism of Pac13, a unique nucleoside… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E2EKP5
- Elsewhere: RCSB PDB 5NJN · PDBe 5NJN · UniProt E2EKP5
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