MolNFT v1 · #128015 · protein
L2 class a serine-beta-lactamase in complex with cyclic boronate 2
5NE1: “L2 class a serine-beta-lactamase in complex with cyclic boronate 2”. X-ray diffraction, 1 ligand (OK3). MolNFT v1 #128015 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NE1
- Type
- protein
- Length
- 540 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9RBQ1
- Ligands
- OK3
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 270 | — | Q9RBQ1 |
Ligands and binding sites
- OK3 · (4~{R})-4-[[4-(aminomethyl)phenyl]carbonylamino]-3,3-bis(oxidanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(10),6,8-triene-10-carboxylic acid · ligand · chains B
- PGE · Triethylene glycol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NE1 · L2 class A serine-beta-lactamase in complex with cyclic boronate 2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RBQ1
- Elsewhere: RCSB PDB 5NE1 · PDBe 5NE1 · UniProt Q9RBQ1
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