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MolNFT v1 · #127870 · protein

Structure of 283-lgny-286, the steric zipper that supports the self- association of P. stuartii omp-PST2 into dimers of trimers

5N9H · Porin: “Structure of 283-lgny-286, the steric zipper that supports the self- association of P. stuartii omp-PST2 into…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #127870 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
5N9H
Type
protein
Length
16 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Porin
UniProt
A0A0L6X8Y0
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, MPorinprotein40% helix, 0% strandA0A0L6X8Y0

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 2 copies · chains A, B, M

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

3 interfaces between chains.

  • A–M · 91 Ų buried · 2 hydrogen bonds · protein-protein
  • B–C · 90 Ų buried · 0 hydrogen bonds · protein-protein
  • B–M · 13 Ų buried · 0 hydrogen bonds · protein-protein

Compared structures

  • 5N9H · Structure of 283-lgny-286, the steric zipper that supports the self-association of P.… · the same entry in another collection · chain A against A, TM-score 1.00

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