MolNFT v1 · #127805 · protein

Crystal structure of the periplasmic domain of xcpy, ti crystal form.

5N7L · Type II secretion system protein L: “Crystal structure of the periplasmic domain of xcpy, ti crystal form.”. X-ray diffraction, 2 ligands (GLU, BR). MolNFT v1 #127805 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5N7L
Type: protein
Length: 80 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Type II secretion system protein L
UniProt: P25060
Ligands: GLU, BR

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type II secretion system protein L	protein	80	33% helix, 41% strand	P25060

Ligands and binding sites

GLU · Glutamic acid · ligand · 3 copies · chains A
BR · Bromide ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5N7L · Crystal structure of the periplasmic domain of XcpY, tI crystal form. · the same entry in another collection · chain A against A, TM-score 1.00
P25060 · AlphaFold monomer V2.0 prediction for type II secretion system protein L (P25060) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P25060
Elsewhere: RCSB PDB 5N7L · PDBe 5N7L · UniProt P25060

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