MolNFT v1 · #127789 · protein

Crystal structure of the legionella effector wipa shorter construct

5N72: “Crystal structure of the legionella effector wipa shorter construct”. X-ray diffraction, 1 pocket (best druggability 0.50). MolNFT v1 #127789 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5N72
Type: protein
Length: 387 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Wipa
UniProt: Q5GA16
Pockets: 1 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 56% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Wipa	protein	387	56% helix, 11% strand	Q5GA16

Ligands and binding sites

ACT · Acetate ion · additive · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	108	0.50	0.81	27	ACT

Compared structures

5N72 · Crystal structure of the Legionella effector WipA shorter construct · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5GA16
Elsewhere: RCSB PDB 5N72 · PDBe 5N72 · UniProt Q5GA16

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