MolNFT v1 · #12762 · protein

Crystal structure of holo-crbp from zebrafish

1KQW · Cellular retinol-binding protein: “Crystal structure of holo-crbp from zebrafish”. X-ray diffraction, 1 ligand (RTL), 1 pocket (best druggability 0.83). MolNFT v1 #12762 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1KQW
Type: protein
Length: 134 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cellular retinol-binding protein
UniProt: Q8UVG6
Ligands: RTL
Pockets: 1 · best druggability 0.83

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 54% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cellular retinol-binding protein	protein	134	11% helix, 54% strand	Q8UVG6

Ligands and binding sites

RTL · Retinol · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	290	0.83	0.94	37	RTL

Compared structures

1KQW · Crystal structure of holo-CRBP from zebrafish · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8UVG6
Elsewhere: RCSB PDB 1KQW · PDBe 1KQW · UniProt Q8UVG6

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