MolNFT v1 · #127619 · protein
Structure of XECO2 acetyltransferase domain bound to K105-CoA conjugate
5N1W: “Structure of XECO2 acetyltransferase domain bound to K105-CoA conjugate”. X-ray diffraction, 2 ligands (8HB, MG). MolNFT v1 #127619 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5N1W
- Type
- protein
- Length
- 348 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A8QZK6
- Ligands
- 8HB, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 170 | — | A8QZK6 |
| B | — | protein | 166 | — | A8QZK6 |
| C | — | protein | 6 | — | — |
| D | — | protein | 6 | — | — |
Ligands and binding sites
- 8HB · (2~{S})-2-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R}, 5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]p ropanoic acid · ligand · 2 copies · chains B, C, A, D
- MG · Magnesium ion · metal · 2 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5N1W · Structure of xEco2 acetyltransferase domain bound to K105-CoA conjugate · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8QZK6
- Elsewhere: RCSB PDB 5N1W · PDBe 5N1W · UniProt A8QZK6
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