MolNFT v1 · #127612 · protein
Crystal structure of the polysaccharide deacetylase BC1974 from bacillus cereus in complex with N-hydroxynaphthalene-1-carboxamide
5N1P: “Crystal structure of the polysaccharide deacetylase BC1974 from bacillus cereus in complex with…”. X-ray diffraction, 3 ligands (8GK, ZN, NA). MolNFT v1 #127612 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5N1P
- Type
- protein
- Length
- 824 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q81EJ6
- Ligands
- 8GK, ZN, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 206 | — | Q81EJ6 |
Ligands and binding sites
- 8GK · ~{N}-oxidanylnaphthalene-1-carboxamide · ligand · 4 copies · chains A, D, B, C
- ZN · Zinc ion · metal · 4 copies · chains A, B, C, D
- NA · Sodium ion · metal · 2 copies · chains D
- EDO · 1,2-ethanediol · additive · chains B
- PGE · Triethylene glycol · additive · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5N1P · Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in… · the same entry in another collection · chain A against A, TM-score 1.00
- Q81EJ6 · AlphaFold monomer V2.0 prediction for peptidoglycan-N- acetylglucosamine deacetylase… · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q81EJ6
- Elsewhere: RCSB PDB 5N1P · PDBe 5N1P · UniProt Q81EJ6
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