MolNFT v1 · #127501 · protein
Solution structure of C20S variant of dehydroascorbate reductase 3A from populus trichocarpa in complex with dehydroascorbic acid.
5MYE · Dehydroascorbate reductase family protein: “Solution structure of C20S variant of dehydroascorbate reductase 3A from populus trichocarpa in complex with…”. Solution nmr, 1 ligand (UU3), 2 pockets (best druggability 0.46). MolNFT v1…
- PDB
- 5MYE
- Type
- protein
- Length
- 212 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dehydroascorbate reductase family protein
- UniProt
- B9HM36
- Ligands
- UU3
- Pockets
- 2 · best druggability 0.46
Structure
solution nmr · 1 distinct chain · 48% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dehydroascorbate reductase family protein | protein | 212 | 48% helix, 10% strand | B9HM36 |
Ligands and binding sites
- UU3 · (5R)-5-[(1S)-1,2-bis(oxidanyl)ethyl]oxolane-2,3,4-trione · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.46 | 0.82 | 15 | empty |
| 2 | 110 | 0.46 | 0.78 | 21 | UU3 |
Compared structures
- 5MYE · Solution structure of C20S variant of Dehydroascorbate reductase 3A from Populus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9HM36
- Elsewhere: RCSB PDB 5MYE · PDBe 5MYE · UniProt B9HM36
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