MolNFT v1 · #127245 · protein

NMR solution structure of macro domain from venezuelan equine encephalitis VIRUS(VEEV) in complex with ADP-ribose

5MQX · Non-structural PROTEIN3: “NMR solution structure of macro domain from venezuelan equine encephalitis VIRUS(VEEV) in complex with…”. Solution nmr, 1 ligand (APR), 1 pocket (best druggability 0.62). MolNFT v1 #127245 on GenesisL1: 3D…

PDB: 5MQX
Type: protein
Length: 160 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Non-structural PROTEIN3
EC: 2.1.1.-, 2.7.7.-, 3.1.3.33, 3.4.22.-, 3.6.1.15, 3.6.4.13, 2.7.7.48
UniProt: P36328
Ligands: APR
Pockets: 1 · best druggability 0.62

Structure

solution nmr · 1 distinct chain · 35% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Non-structural PROTEIN3 (EC 2.1.1.-, 2.7.7.-, 3.1.3.33, 3.4.22.-, 3.6.1.15, 3.6.4.13, 2.7.7.48)	protein	160	35% helix, 19% strand	P36328

Ligands and binding sites

APR · Adenosine-5-diphosphoribose · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	255	0.62	0.81	30	APR

Compared structures

5MQX · NMR solution structure of macro domain from Venezuelan equine encephalitis virus(VEEV) in… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36328
Elsewhere: RCSB PDB 5MQX · PDBe 5MQX · UniProt P36328

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