MolNFT v1 · #126992 · protein
Crystal structure of rosb with bound intermediate ohc-rp (8-demethyl- 8-formylriboflavin-5'-phosphate)
5MJI: “Crystal structure of rosb with bound intermediate ohc-rp (8-demethyl- 8-formylriboflavin-5'-phosphate)”. X-ray diffraction, 1 ligand (7O6). MolNFT v1 #126992 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MJI
- Type
- protein
- Length
- 252 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- K4REZ6
- Ligands
- 7O6
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 252 | — | K4REZ6 |
Ligands and binding sites
- 7O6 · [(2~{S},3~{R},4~{R})-5-[8-methanoyl-7-methyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-ium-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5MJI · Crystal Structure of RosB with bound intermediate OHC-RP… · the same entry in another collection · chain A against A, TM-score 1.00
- K4REZ6 · AlphaFold monomer V2.0 prediction for 8-demethyl-8-aminoriboflavin-5'-phosphate synthase… · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K4REZ6
- Elsewhere: RCSB PDB 5MJI · PDBe 5MJI · UniProt K4REZ6
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