MolNFT v1 · #126883 · protein
Putative ancestral mamba toxin 1 (ANCTX1-W28R/I38S)
5MG9: “Putative ancestral mamba toxin 1 (ANCTX1-W28R/I38S)”. X-ray diffraction, 2 ligands (YVR, SO4). MolNFT v1 #126883 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MG9
- Type
- protein
- Length
- 65 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ANCTX1-W28R/I38S
- Ligands
- YVR, SO4
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ANCTX1-W28R/I38S | protein | 65 | 0% helix, 55% strand | — |
Ligands and binding sites
- YVR · gamma-Valerolactone · ligand · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A
- PGO · S-1,2-propanediol · additive · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 5MG9 · Putative Ancestral Mamba toxin 1 (AncTx1-W28R/I38S) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5MG9 · PDBe 5MG9
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