MolNFT v1 · #126820 · protein
Cyanothece lipoxygenase 2 (CSPLOX2)
5MED: “Cyanothece lipoxygenase 2 (CSPLOX2)”. X-ray diffraction, 1 ligand (FE). MolNFT v1 #126820 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MED
- Type
- protein
- Length
- 1,134 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B7JX99
- Ligands
- FE
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 569 | — | B7JX99 |
| B | — | protein | 565 | — | B7JX99 |
Ligands and binding sites
- FE · Fe (III) ion · metal · 2 copies · chains A, B
- PGR · R-1,2-propanediol · additive · 6 copies · chains A, B
- BU1 · 1,4-butanediol · additive · 4 copies · chains A, B
- POL · N-propanol · additive · 2 copies · chains A, B
- PDO · 1,3-propandiol · additive · 2 copies · chains A, B
- GOL · Glycerol · additive · chains A
- HEZ · Hexane-1,6-diol · additive · chains A
- 1BO · 1-butanol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5MED · Cyanothece lipoxygenase 2 (CspLOX2) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7JX99
- Elsewhere: RCSB PDB 5MED · PDBe 5MED · UniProt B7JX99
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