MolNFT v1 · #126702 · protein
Crystal structure of polyphosphate kinase from meiothermus ruber bound to ADP and ppi
5MAQ: “Crystal structure of polyphosphate kinase from meiothermus ruber bound to ADP and ppi”. X-ray diffraction, 3 ligands (ADP, PPV, MG). MolNFT v1 #126702 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MAQ
- Type
- protein
- Length
- 1,032 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0S7ASE9
- Ligands
- ADP, PPV, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 257 | — | A0A0S7ASE9 |
| B | — | protein | 256 | — | A0A0S7ASE9 |
| C | — | protein | 258 | — | A0A0S7ASE9 |
| D | — | protein | 261 | — | A0A0S7ASE9 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 4 copies · chains A, B, C, D
- PPV · Pyrophosphate · ligand · 4 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 4 copies · chains A, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5MAQ · Crystal Structure of Polyphosphate Kinase from Meiothermus ruber bound to ADP and PPi · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0S7ASE9
- Elsewhere: RCSB PDB 5MAQ · PDBe 5MAQ · UniProt A0A0S7ASE9
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