MolNFT v1 · #126700 · protein

Hera helicase RNA binding domain with tncs in P212121

5MAO · Heat resistant RNA dependent ATPase: “Hera helicase RNA binding domain with tncs in P212121”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.47). MolNFT v1 #126700 on GenesisL1: 3D structure, binding sites and…

PDB: 5MAO
Type: protein
Length: 142 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Heat resistant RNA dependent ATPase
UniProt: Q72GF3
Ligands: SO4
Pockets: 1 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 14% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Heat resistant RNA dependent ATPase	protein	71	14% helix, 31% strand	Q72GF3

Ligands and binding sites

SO4 · Sulfate ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	146	0.47	0.78	25	empty

Interfaces

1 interface between chains.

A–B · 223 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

5MAO · HERA HELICASE RNA BINDING DOMAIN with TNCS in P212121 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q72GF3
Elsewhere: RCSB PDB 5MAO · PDBe 5MAO · UniProt Q72GF3

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