MolNFT v1 · #126673 · protein
Structure of sucrose phosphorylase from bifidobacterium adolescentis bound to glycosylated resveratrol
5M9X: “Structure of sucrose phosphorylase from bifidobacterium adolescentis bound to glycosylated resveratrol”. X-ray diffraction, 1 ligand (7KP). MolNFT v1 #126673 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5M9X
- Type
- protein
- Length
- 504 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q84HQ2
- Ligands
- 7KP
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 504 | — | Q84HQ2 |
Ligands and binding sites
- 7KP · (2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[3-[(~{E})-2-(4-hydroxyphenyl)ethenyl]-5-oxidanyl-phenoxy]oxane-3,4,5-triol · ligand · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5M9X · Structure of sucrose phosphorylase from Bifidobacterium adolescentis bound to… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84HQ2
- Elsewhere: RCSB PDB 5M9X · PDBe 5M9X · UniProt Q84HQ2
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