MolNFT v1 · #126618 · protein
Spliceosome component
5M88 · Core: “Spliceosome component”. X-ray diffraction, 1 pocket (best druggability 0.45). MolNFT v1 #126618 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5M88
- Type
- protein
- Length
- 242 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Core
- UniProt
- G0SFY0
- Pockets
- 1 · best druggability 0.45
Structure
x-ray diffraction · 1 distinct chain · 62% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Core | protein | 121 | 62% helix, 8% strand | G0SFY0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.45 | 0.75 | 32 | empty |
Interfaces
1 interface between chains.
- A–B · 2459 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 5M88 · Spliceosome component · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0SFY0
- Elsewhere: RCSB PDB 5M88 · PDBe 5M88 · UniProt G0SFY0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.