MolNFT v1 · #126548 · protein
Crystal structure of S-adenosyl-L-homocysteine hydrolase from bradyrhizobium elkanii in complex with adenosine
5M66: “Crystal structure of S-adenosyl-L-homocysteine hydrolase from bradyrhizobium elkanii in complex with adenosine”. X-ray diffraction, 3 ligands (NAD, ADN, NA). MolNFT v1 #126548 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5M66
- Type
- protein
- Length
- 1,863 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A087WNH6
- Ligands
- NAD, ADN, NA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 468 | — | A0A087WNH6 |
| B | — | protein | 464 | — | A0A087WNH6 |
| C | — | protein | 463 | — | A0A087WNH6 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 4 copies · chains A, B, C, D
- ADN · Adenosine · ligand · 4 copies · chains A, B, C, D
- NA · Sodium ion · metal · 4 copies · chains A, B, C, D
- PEG · Di(hydroxyethyl)ether · additive · 5 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A087WNH6
- Elsewhere: RCSB PDB 5M66 · PDBe 5M66 · UniProt A0A087WNH6
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