MolNFT v1 · #126462 · protein

Crystal structure of TIF6 from chaetomium thermophilum

5M3Q · Eukaryotic translation initiation factor 6: “Crystal structure of TIF6 from chaetomium thermophilum”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.83). MolNFT v1 #126462 on GenesisL1: 3D structure, binding sites…

PDB: 5M3Q
Type: protein
Length: 224 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Eukaryotic translation initiation factor 6
UniProt: G0S683
Ligands: SO4
Pockets: 1 · best druggability 0.83

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Eukaryotic translation initiation factor 6	protein	224	31% helix, 27% strand	G0S683

Ligands and binding sites

SO4 · Sulfate ion · ion · 3 copies · chains A
GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	184	0.83	0.98	35	GOL

Compared structures

5M3Q · Crystal structure of Tif6 from Chaetomium thermophilum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0S683
Elsewhere: RCSB PDB 5M3Q · PDBe 5M3Q · UniProt G0S683

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