MolNFT v1 · #126351 · RNA
Crystal structure of the central flexible region of ASH1 mRNA E3- localization element
5M0H · ASH1 E3 (42 nt-TL/TLR): “Crystal structure of the central flexible region of ASH1 mRNA E3- localization element”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.53). MolNFT v1 #126351 on GenesisL1: 3D structure…
- PDB
- 5M0H
- Type
- RNA
- Length
- 42 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ASH1 E3 (42 nt-TL/TLR)
- Ligands
- SO4
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ASH1 E3 (42 nt-TL/TLR) | rna | 42 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 418 | 0.53 | 0.73 | 27 | empty |
Compared structures
- 5M0H · Crystal structure of the central flexible region of ASH1 mRNA E3-localization element · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5M0H · PDBe 5M0H
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