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MolNFT v1 · #126233 · protein

Crystal structure of JAK3 in complex with compound 5 (FM409)

5LWN: “Crystal structure of JAK3 in complex with compound 5 (FM409)”. X-ray diffraction, 3 ligands (PHU, 79R, 79S). MolNFT v1 #126233 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5LWN
Type
protein
Length
290 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P52333
Ligands
PHU, 79R, 79S

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein290—P52333

Ligands and binding sites

  • PHU · 1-phenylurea · ligand · chains A
  • 79R · (~{Z})-2-cyano-~{N},~{N}-dimethyl-3-[5-[3-[(1~{S}, 2~{R})-2-methylcyclohexyl]-3,5,8,10-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1,4,6,8,11-pentaen-4-yl]furan-2-yl]prop-2-enamide · ligand · chains A
  • 79S · (2~{S})-2-cyano-~{N},~{N}-dimethyl-3-[5-[3-[(1~{S}, 2~{R})-2-methylcyclohexyl]-3,5,8,10-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1,4,6,8,11-pentaen-4-yl]furan-2-yl]propanamide · ligand · chains A
  • EDO · 1,2-ethanediol · additive · 6 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5LWN · Crystal structure of JAK3 in complex with Compound 5 (FM409) · the same entry in another collection · chain A against A, TM-score 1.00
  • P52333 · AlphaFold monomer V2.0 prediction for tyrosine-protein kinase JAK3 (P52333) · a predicted model of the same protein · chain A against A, TM-score 0.96

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