MolNFT v1 · #126218 · protein

NMR solution structure of helicobacter pylori tonb-ctd (residues 194- 285)

5LW8 · Protein tonb: “NMR solution structure of helicobacter pylori tonb-ctd (residues 194- 285)”. Solution nmr, 2 pockets (best druggability 0.38). MolNFT v1 #126218 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5LW8
Type: protein
Length: 92 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein tonb
UniProt: O25899
Pockets: 2 · best druggability 0.38

Structure

solution nmr · 1 distinct chain · 35% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein tonb	protein	92	35% helix, 27% strand	O25899

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	60	0.38	0.78	19	empty
2	52	0.27	0.74	14	empty

Compared structures

5LW8 · NMR solution structure of Helicobacter pylori TonB-CTD (residues 194-285) · the same entry in another collection · chain A against A, TM-score 1.00
O25899 · AlphaFold monomer V2.0 prediction for protein tonb (O25899) · a predicted model of the same protein · chain A against A, TM-score 0.82

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O25899
Elsewhere: RCSB PDB 5LW8 · PDBe 5LW8 · UniProt O25899

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