MolNFT v1 · #126133 · protein
Structure of the yellow-green fluorescent protein mneongreen from branchiostoma lanceolatum at the acidic pH 4.5
5LTP: “Structure of the yellow-green fluorescent protein mneongreen from branchiostoma lanceolatum at the acidic pH…”. X-ray diffraction, 2 ligands (CR2, CL). MolNFT v1 #126133 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5LTP
- Type
- protein
- Length
- 1,332 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CR2, CL
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 218 | — | — |
| B | — | protein | 225 | — | — |
| C | — | protein | 222 | — | — |
| D, F | — | protein | 223 | — | — |
| E | — | protein | 221 | — | — |
Ligands and binding sites
- CR2 · {(4Z)-2-(aminomethyl)-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid · ligand · 6 copies · chains A, B, C, D, E, F
- CL · Chloride ion · ion · 6 copies · chains A, B, C, D, E, F
- FLC · Citrate anion · additive · 3 copies · chains A, E, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5LTP · Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5LTP · PDBe 5LTP
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