MolNFT v1 · #126041 · protein

Structure of F-ATPase from pichia angusta, STATE1

5LQZ: “Structure of F-ATPase from pichia angusta, STATE1”. Electron microscopy, 3 ligands (ADP, ATP, MG). MolNFT v1 #126041 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5LQZ
Type: protein
Length: 4,881 residues
Chains: 30
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Ligands: ADP, ATP, MG

Structure

electron microscopy · 26 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
1	—	protein	30	—	—
2	—	protein	25	—	—
3	—	protein	17	—	—
4	—	protein	27	—	—
A	—	protein	506	—	—
B	—	protein	492	—	—
C	—	protein	503	—	—
D	—	protein	471	—	—
E	—	protein	469	—	—
F	—	protein	470	—	—
G	—	protein	267	—	—
H	—	protein	128	—	—
I	—	protein	57	—	—
J	—	protein	43	—	—
K	—	protein	73	—	—
L	—	protein	71	—	—
M, N	—	protein	72	—	—
O, R, S	—	protein	73	—	—
P, Q	—	protein	74	—	—
T	—	protein	72	—	—
U	—	protein	163	—	—
V	—	protein	154	—	—
W	—	protein	145	—	—
X	—	protein	21	—	—
Y	—	protein	122	—	—
Z	—	protein	44	—	—

Ligands and binding sites

ADP · Adenosine-5'-diphosphate · ligand · 5 copies · chains B, C, F, D, E
ATP · Adenosine-5'-triphosphate · ligand · chains A
MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5LQZ · Structure of F-ATPase from Pichia angusta, state1 · the same entry in another collection · chain D against D, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5LQZ · PDBe 5LQZ

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